This presentation illustrates the unusual genomic features that GEP students have encountered as part of their annotation of Muller F Elements from Drosophila ananassae and D. bipectinata. The Muller F Elements in these two species have undergone substantial expansion compared to D. melanogaster. The presentation describes the basic strategy for identifying pseudogenes, retrogenes, partial gene duplications, pseudogene clusters, and nuclear mitochondrial DNA segments (NUMT) within these F Element annotation projects.
Annotation of Other Genomic Features within the F Element Project
- Last Reviewed: August 17, 2024
- Last Updated: August 17, 2024
- Wilson Leung
- Created: July 8, 2022
- Curriculum Section: Gene Annotation
- Curriculum Type: Project Resource
- NIBLSE Competencies: C4
- Topic Tags: Annotation Strategy, Gene Finding, NUMT, RNA-Seq
- Tool Tags: BLAST, FlyBase, UCSC Genome Browser