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Publications

Group pose in front of conference poster

Since its founding in 2006, the Genomics Education Partnership’s published scholarship has advanced the understanding of genome evolution and effective pedagogical practices in STEM. Through the GEP’s research projects, more than 1,100 students (and counting) have contributed as co-authors on published scientific research papers.

GEP New Publication Alert

Long-read genome assemblies for the study of chromosome expansion: Drosophila kikkawai, Drosophila takahashii, Drosophila bipectinata, and Drosophila ananassae

G3 Bethesda. 2023 Sep 30;13(10):jkad191.

Supporting the democratization of science during a pandemic: genomics Course-based Undergraduate Research Experiences (CUREs) as an effective remote learning strategy

Journal of Microbiology and Biology Education 24.3 (2023): e00039-23.

Manual annotation of Drosophila genes: a Genomics Education Partnership protocol

F1000Research 2023, 11:1579

The Genomics Education Partnership: First Findings on Genomics Research in Community Colleges

SPUR, 6(3):17-28, 2023

Student Attitudes Contribute to the Effectiveness of a Genomics CURE

J Microbiol Biol Educ., e00208-21., 2022

Facilitating Growth through Frustration: Using Genomics Research in a Course-Based Undergraduate Research Experience

J Microbiol Biol Educ., 21(1):21.1.6., 2020

Retrotransposons Are the Major Contributors to the Expansion of the Drosophila ananassae Muller F Element

G3 (Bethesda), 7(8):2439‐2460, 2017

An undergraduate bioinformatics curriculum that teaches eukaryotic gene structure

CourseSource, cs. 13. 2017

The GEP: Crowd-Sourcing Big Data Analysis with Undergraduates

Trends Genet, 33(2):81‐85, 2017

A Hands-on Introduction to Hidden Markov Models

CourseSource, cs. 8, 2016

Drosophila Muller F Elements Maintain a Distinct Set of Genomic Properties Over 40 Million Years of Evolution

G3 (Bethesda), 5(5):719‐740, 2015

A central support system can facilitate implementation and sustainability of a Classroom-based Undergraduate Research Experience (CURE) in Genomics

CBE Life Sci Educ., 13(4):711‐723, 2014

A Course-Based Research Experience: How Benefits Change with Increased Investment in Instructional Time

CBE Life Sci Educ., 13(1):111‐130, 2014

Evolution of a distinct genomic domain in Drosophila: comparative analysis of the dot chromosome in D. melanogaster and D. virilis

Genetics, 185(4):1519‐1534, 2010

The Genomics Education Partnership: Successful Integration of Research Into Laboratory Classes at a Diverse Group of Undergraduate Institutions

CBE Life Sci Educ., 9(1):55‐69, 2010

Undergraduate Research: Genomics Education Partnership

Science, 322(5902):684‐685, 2008

Comparison of Dot Chromosome Sequences from D. melanogaster and D. virilis Reveals an Enrichment of DNA Transposon Sequences in Heterochromatic Domains

Genome Biol., 7(2):R15, 2006