This walkthrough uses FlyBase RNA-Seq Search and the MEME suite to discover motifs that are enriched in a collection of D. melanogaster Muller F element genes that show similar expression patterns.
Archived Curriculum
This curriculum is no longer being actively maintained by the GEP Curriculum Committee.
Motif Discovery in Drosophila
- Last Reviewed: December 27, 2021
- Last Updated: December 27, 2021
- Wilson Leung
- Created: August 23, 2014
- Curriculum Section: Bioinformatics
- Curriculum Type: Walkthrough
- Target Audience: Advanced Student
- NIBLSE Competencies: C4
- Topic Tags: Motif Finding, RNA-Seq
- Tool Tags: FlyBase, FlyFactorSurvey, MAST, MEME, Tomtom