This document describes the list of tools developed by the GEP to facilitate incorporation of additional reads from the NCBI Trace Archive into a sequence improvement project. This document shows how to install the tools, and illustrates their use in two case studies (walkthroughs) of challenging fosmid assemblies.
Archived Curriculum
This curriculum is no longer being actively maintained by the GEP Curriculum Committee.
GEP Misassembly Tools User Guide
- Last Reviewed: January 3, 2013
- Last Updated: January 3, 2013
- Wilson Leung, Chris Shaffer
- Created: January 3, 2013
- Curriculum Section: Sequence Improvement
- Curriculum Type: Reference
- Topic Tags: Sanger Assembly
- Tool Tags: Consed, GEP Assembly Tool, NCBI Trace Archive