This is a series of three 3-hour exercises that guide students on the DNA Subway, an online workspace that integrates tools for genomic analysis in a student and educator-friendly environment. Exercise 1 was developed by Dr. Judy Brusslan (California State University, Long Beach). The Exercise I and II PowerPoints and Exercise II were developed by Dr. James Youngblom (California State University Stanislaus). The “Prospecting for Green Revolution Genes” presentation and Exercise III were developed by Dr. Nicholas Ewing (California State University, Sacramento) based on materials initially developed by members of the iPlant Collaborative.
Archived Curriculum
This curriculum is no longer being actively maintained by the GEP Curriculum Committee.
Plant Genes Annotation and Analysis
- Last Reviewed: February 21, 2012
- Last Updated: February 21, 2012
- Judy Brusslan, James Youngblom, Nicholas Ewing
- Created: February 21, 2012
- Curriculum Section: Gene Annotation
- Curriculum Type: Lesson with Exercises
- NIBLSE Competencies: C4, C6
- Topic Tags: Gene Finding, Multiple Sequence Alignment, Similarity Search, Transposon
- Tool Tags: BLAST, DNA Subway, NCBI, RepeatMasker