This lecture from Dr. Barak Cohen discusses the major factors to consider (e.g., species to analyze, model for conserved sequences) when using phylogenetic footprinting to identify conserved regions across multiple species. The lecture also illustrates how the weight matrix model can be used to describe sequence motifs, and it provides an introduction to Magma, which uses the multiple species with multiple genes approach to discover conserved motifs.
Eukaryotic Comparative Genomics
- Barak Cohen
- Created: June 11, 2018
- Last Reviewed: December 23, 2020
- Last Updated: December 23, 2020