Synteny Introduction Slides
This resource is a slide deck offering an expanded introduction to synteny. Instructors are encouraged to use and modify to fit the needs of specific courses and students.
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Synteny
Genomic Neighborhood Check For Understanding
This was created in response to a member mentioning their students really struggled with the genomic neighborhood and the member didn’t realize until they were already too far into the annotation to correct their misconceptions. This is meant to be a quick in-class and/or homework assignment.
Pathways Project: Annotation Videos
This series of videos is intended to help GEP students annotate a Pathways Project gene from start to finish.
Pathways Project: Annotation Walkthrough
The Pathways Project is focused on annotating genes found in well characterized signaling and metabolic pathways across the Drosophila genus. This walkthrough illustrates how to apply the GEP annotation strategy for the Pathways Project to construct a gene model for the Ras homolog enriched in brain (Rheb) gene in Drosophila yakuba.
About Synteny Analysis
A one-page summary of the logic process used to determine if genes in a fosmid are syntenic with respect to D. melanogaster
Introduction to Pathways Project
Lecture is designed to introduce students to the big picture of the Pathways Project.