TinyPubs

TinyPubs are draft microPublication articles that have been adapted by GEP faculty and students for submission to bioRxiv. The TinyPubs will initially focus on the gene annotations of single orthologs from the Pathways Project.

#	Publication	Track Hub	Student Coauthors	Faculty Coauthors	Scientific Staff	Citation
13.	Gene model for the ortholog of foxo in Drosophila sechellia	DsecCAF1_foxo	Megan E. Lawson, Brandon A. Ruscoe, George G. Njuguna, Michelle L. Aguilar-Medina, Sarah Raab	Eve Mellgren, Amy T. Hark, Natalie Minkovsky		Lawson M. E., Ruscoe B. A., Njuguna G. G., Aguilar-Medina M. L., Raab S., Mellgren E., Hark A. T., & Minkovsky N. (2025). Gene model for the ortholog of foxo in Drosophila sechellia. bioRxiv, 2025.09.08.674750. https://doi.org/10.1101/2025.09.08.674750
12.	Gene model for the ortholog of Ilp4 in Drosophila eugracilis	DeugGB2_Ilp4	Rachael Cowan, Amun Uppal, Clairine I. S. Larsen	Christopher E. Ellison, Nicole S. Torosin, Jeffrey S. Thompson, Lori Boies	Chinmay P. Rele	Cowan, R., Uppal, A., Larsen, C. I. S., Ellison, C. E., Torosin, N. S., Thompson, J. S., Rele, C. P., & Boies, L. (2025). Gene model for the ortholog of Ilp4 in Drosophila eugracilis. bioRxiv, 2025.09.05.674564. https://doi.org/10.1101/2025.09.05.674564
11.	Gene model for the ortholog of Ilp4 in Drosophila grimshawi	DgriCAF1_Ilp4	Rachael Cowan, Alyssa Koehler, Clairine I. S. Larsen	Jeffrey S. Thompson, Andrew M. Arsham, Lori Boies		Cowan, R., Koehler, A., Larsen, C. I. S., Thompson, J. S., Arsham, A. M., & Boies, L. (2025). Gene model for the ortholog of Ilp4 in Drosophila grimshawi. bioRxiv, 2025.08.25.672213. https://doi.org/10.1101/2025.08.25.672213
10.	Gene model for the ortholog of Ilp3 in Drosophila eugracilis	DeugGB2_Ilp3	James O'Brien, Ryan Dufur, Martina Kotrba, Jeremiah Severn	Jacqueline Wittke-Thompson, Christine M. Fleet	Chinmay P. Rele	O’Brien, J., Dufur, R., Kotrba, M., Severn, J., Wittke-Thompson, J., Rele, C. P., & Fleet, C. M. (2025). Gene model for the ortholog of Ilp3 in Drosophila eugracilis. bioRxiv, 2025.08.16.670678. https://doi.org/10.1101/2025.08.16.670678
9.	Gene model for the ortholog of cnk in Drosophila erecta	DereCAF1_cnk	Leon F. Laskowski, Brianna Cowan, Greta Leissa, Harper O. W. Wallace	Indrani Bose, Jeffrey S. Thompson, Maria S. Santisteban		Laskowski, L. F., Cowan, B., Leissa, G., Wallace, H. O. W., Bose, I., Thompson, J. S., & Santisteban, M. S. (2025). Gene model for the ortholog of cnk in Drosophila erecta. bioRxiv, 2025.08.06.668985. https://doi.org/10.1101/2025.08.06.668985
8.	Gene model for the ortholog of Akt in Drosophila elegans	DeleGB2_Akt	Jhilam Dasgupta, Ashley Morgan, Anne E. Backlund, Juncheng Luo, Jefferson Waters	Jennifer A. Kennell		Dasgupta, J., Morgan, A., Backlund, A. E., Luo, J., Waters, J., & Kennell, J. A. (2025). Gene model for the ortholog of Akt in Drosophila elegans. bioRxiv, 2025.08.06.668967. https://doi.org/10.1101/2025.08.06.668967
7.	Gene model for the ortholog of Ilp5 in Drosophila erecta	DereCAF1_Ilp5	Leon F. Laskowski, Bethany C. Lieser, Sarah L. Hewitt, Miryam Perez, Brittany E. Saciccioli	Jacqueline Wittke-Thompson, Scott Tanner, Rachel Sterne-Marr		Laskowski, L. F., Lieser, B. C., Hewitt, S. L., Perez, M., Saciccioli, B. E., Wittke-Thompson, J., Tanner, S., & Sterne-Marr, R. (2025). Gene model for the ortholog of Ilp5 in Drosophila erecta. bioRxiv, 2025.08.05.668546. https://doi.org/10.1101/2025.08.05.668546
6.	Gene model for the ortholog of tgo in Drosophila miranda	DmirGB2_tgo	Graham M. Jones, Abbie A. Giunta, Hanah Mastandrea	Jacqueline K. Wittke-Thompson		Jones, G. M., Giunta, A. A., Mastandrea, H., & Wittke-Thompson, J. K. (2025). Gene model for the ortholog of tgo in Drosophila miranda. bioRxiv, 2025.08.04.668519. https://doi.org/10.1101/2025.08.04.668519
5.	Gene model for the ortholog of Pi3K21B in Drosophila eugracilis	DeugRefSeq2_Pi3K21B	Bethany C. Lieser, Ryan M. Bonthius, Clairine I.S. Larsen	Jeffrey S. Thompson, Stephanie Toering Peters		Lieser, B. C., Bonthius, R. M., Larsen, C. I. S., Thompson, J. S., & Toering Peters, S. (2025). Gene model for the ortholog of Pi3K21B in Drosophila eugracilis. bioRxiv, 2025.07.21.665947. https://doi.org/10.1101/2025.07.21.665947
4.	Gene model for the ortholog of Glyp in Drosophila pseudoobscura	DpseGB3_Glyp	Megan E. Lawson, Isabel G. Wellik, Viet Le, Evan N. Bennett	Jeffrey S. Thompson, Shallee T. Page, Amy T. Hark	Chinmay P. Rele	Lawson, M. E., Wellik, I. G., Le, V., Bennett, E. N., Thompson, J. S., Page, S. T., Rele, C. P., & Hark, A. T. (2025). Gene model for the ortholog of Glyp in Drosophila pseudoobscura. bioRxiv, 2025.07.18.665514. https://doi.org/10.1101/2025.07.18.665514
3.	Gene model for the ortholog of Glyp in Drosophila ananassae	DanaCAF1_Glyp	Gabriella N. Bicanovsky, Evan N. Bennett, Zachary Lill, Rebecca M. McSweeney	Geoffrey D. Findlay, Amy T. Hark, Shallee T. Page	Chinmay P. Rele	Bicanovsky, G. N., Bennett, E. N., Lill, Z., McSweeney, R. M., Findlay, G. D., Hark, A. T., Rele, C. P., & Page, S. T. (2025). Gene model for the ortholog of Glyp in Drosophila ananassae. bioRxiv, 2025.07.18.665411. https://doi.org/10.1101/2025.07.18.665411
2.	Gene model for the ortholog of tgo in Drosophila pseudoobscura	DpseGB3_tgo	Megan E. Lawson, Janelle Marie Suriaga, Mary B. Rowland	Laura K. Reed, Jacqueline K. Wittke-Thompson	Chinmay P. Rele	Lawson, M. E., Suriaga, J. M., Rowland, M. B., Reed, L. K., Rele, C. P., & Wittke-Thompson, J. K. (2025). Gene model for the ortholog of tgo in Drosophila pseudoobscura. bioRxiv, 2025.07.13.664599. https://doi.org/10.1101/2025.07.13.664599
1.	Gene model for the ortholog of Glys in Drosophila ananassae	DanaCAF1_Glys	Madeline L. Gruys, Abigail R. Myers, Cole A. Kiser, Leon F. Laskowski, Isaac Romo, Amber Marie Richardson	James J. Youngblom, Laura K. Reed	Chinmay P. Rele	Gruys, M. L., Myers, A. R., Kiser, C. A., Laskowski, L. F., Romo, I., Richardson, A. M., Youngblom, J. J., Rele, C. P., & Reed, L. K. (2025). Gene model for the ortholog of Glys in Drosophila ananassae. bioRxiv, 2025.07.09.662856. https://doi.org/10.1101/2025.07.09.662856

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